Add LIBGL_* package vars to LIBS and CPPFLAGS so subsequent checks still work
configure
configure.in
src/Makefile.am
src/Makefile.in

Rearrange the main translation loop to allow translated blocks to jump
directly to their successors without needing to return to the main loop
in between. Shaves about 6% off the core runtime.
src/eventq.h
src/sh4/sh4.c
src/sh4/sh4trans.c
src/sh4/sh4x86.in
src/test/testsh4x86.c
src/xlat/x86/amd64abi.h
src/xlat/x86/ia32abi.h
src/xlat/x86/x86op.h

Fix libisofs.h include for pkg-config paths
src/drivers/cdrom/isofs.h
src/main.c

Change GL + libisofs checks to use pkg-config (Patch by ElBarto!)
Makefile.in
configure
configure.in
src/Makefile.am
src/Makefile.in

Integrate executable wrapping into the user interface
- command-line now loads wrapped by default, -e <bin> to run binary
- add support for .bin executables
- Add useful (internal) error codes
src/bootstrap.h
src/cocoaui/cocoaui.m
src/dreamcast.c
src/drivers/cdrom/cd_cdi.c
src/drivers/cdrom/cd_gdi.c
src/drivers/cdrom/cd_linux.c
src/drivers/cdrom/cd_nrg.c
src/drivers/cdrom/cd_osx.c
src/drivers/cdrom/cdrom.c
src/drivers/cdrom/cdrom.h
...

Add ability to wrap a binary program up in a virtual cd image (so that we
can boot it normally)
src/drivers/cdrom/cdrom.c
src/drivers/cdrom/cdrom.h
src/drivers/cdrom/isofs.c
src/drivers/cdrom/isofs.h
src/drivers/cdrom/sector.c
src/loader.c
src/loader.h
src/main.c

Rip out my hacked-up isofs code and replace with libisofs. Much better.
configure
configure.in
src/Makefile.am
src/Makefile.in
src/bios.c
src/drivers/cdrom/iso_impl.h
src/drivers/cdrom/isofs.c
src/drivers/cdrom/isofs.h
src/drivers/cdrom/isoread.c
src/drivers/cdrom/isoread.h
...

Change armmem errors to warnings (should never have been errors)
src/aica/armmem.c

Add file inclusion support
src/tools/mdparse.c

Commit genmach work-in-progress
src/Makefile.am
src/Makefile.in
src/tools/genmach.c
src/tools/genmach.h
src/tools/mdparse.c